Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEDKMDLYLQQGMYGPLETKPDERHLFLGSLRERVVLALTKGQVLRSKPYKEAEHELKNSHNVTLLINGELQYQSYSSYI-QMASRYGVPFKIVSDLQFHTPLGIVIAADIAVNRELIYIQDDIYNRSVLKS
5A2Q Chain:M ((35-82))--------------------------------------------------IREAAKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDN-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5A2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 117 -12425 -106.19 -264.35
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain M : 0.57

3D Compatibility (PKB) : -106.19
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.580

(partial model without unconserved sides chains):
PDB file : Tito_5A2Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A2Q-query.scw
PDB file : Tito_Scwrl_5A2Q.pdb: