Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPIIAGNWKMNKTLGEAVSFVEEVKSSIPAADKAEAVVCAPALFLEKLASAVKGTDLKVGAQNMHFEESGAFTGEISPVALKDLGVDYCVIGHSERREMFAETDETVNKKAHAAFKHGIVPIICVGETLEEREAGKTNDLVADQVKKGLAGLSEEQVAASVIAYEPIWAIGTGKSSTAKDANDVCAHIRKTVAESFSQEAADKLRIQYGGSVKPANIKEYMAESDIDGALVGGASLEPQSFVQLLEEGQYE
5IBX Chain:H ((6-252))-RKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPALDLTTVLAVAKGSNLKVAAQNCYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFANGMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVAASVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVASYMA-PDVDGALVGGASLEAESFLALLD-----


General information:
TITO was launched using:
RESULT:

Template: 5IBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1363 -129263 -94.84 -525.46
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain H : 0.89

3D Compatibility (PKB) : -94.84
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5IBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IBX-query.scw
PDB file : Tito_Scwrl_5IBX.pdb: