Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITESRQMLDKRNRPLRDLRISVTD-RCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRF-GVEKIRLTGGEPLMR-----KDMPELIKKLARIPGIRDIAMTTNGSLL-PVYAKRLKEAGLKRVTISLD---SLEDERFKKINGRGVSVSKVLEGIEAAKQAGLGVKINMVVQKGVNEKDILPMARYFKEKG-HILRFIEFMDVGNTNQWEKKDVMTKAEIIDLINKHMPVEPIAPNYIGEVASRFRYLDGSGEIGVISSVSDA-FCGSCNRARLSA-RGELFTCLFASSGFDLRAPVRQELSDDELSEMIGTVWKNRIDQYSVDRTLSKASGKKKVEMSYIGG-------------------------------------------------------
4K36 Chain:A ((2-392))--------------PPLSLLIKPASSGCNLKCTYCF----YHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSENKF-LVGLSMDGPKEIHNLNRKDCCGLD-TFSKVERAAELFKKYKVEFNILCVVT-SNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLF--DFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTCQFVVESDGSVYPC----DFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLS--FKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1584 46640 29.44 149.49
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 29.44
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_4K36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K36-query.scw
PDB file : Tito_Scwrl_4K36.pdb: