Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG-TGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
3EOV Chain:B ((26-166))
-----------------------GRITIGLFGKDAPLTTENFRQLCTGEHGFG------------YKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADENLNVKHFVGA--LSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDG--MDVVLRIEKTKTNSHDRPVKPVKI------
General information:
TITO was launched using:
RESULT:
Template:
3EOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48786 for 1000 contacts (-48.8/contact) +
2D Compatibility (PS) -14804 + (NN) -10364 + (LL) 1648
1D Compatibility (HY) -10000 + (ID) 3750
Total energy: -86056.0 ( -86.06 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3EOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EOV-query.scw
PDB file :
Tito_Scwrl_3EOV.pdb
: