Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQDQGVPWDLTSYGLAFL-TLFGSAHLAIRRFAPYTDPLLLPVVALLNGLGLVMIHRLDLVDNEIGEHRHPSANQQMLWTLVGVAAFALVVTFLKDHRQLARYGYICGLAGLVFLAVPALLPAALSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLVAKRGLF--TSAGKHLLGMTLPRPRDLAPLLAAWVISVGVMVFE---KDLGASLLLYTSFLVVVYLATQRFSWVVIGLTLFAAGTLVAYFIFEHVRLRVQTWLDPFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAASTDFIIAAFGEELGLVGLTA-ILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTLAIQLFIVV--GGVTRLIPLTGLTTPWMSYGGSSLLANYILLAILARISHGARRPLRTRPRNKSPITAAGTEVIERV-- |
4ZOX Chain:A ((53-431)) | MSNN-------SLTYFDKHTDSVFAIGHHPNLP---LVCTGGGDNLAHLWTSHSQPPKFAGTLTGYGESVIS--CSFTSEGGFLVTADMSGKVLVHMGQ----------------KGGAQWKLASQMQEVEEIVWLKTHPTIARTFAFGATDG-------SVWCYQINEQDG-SLEQLMSGFVHQQD----------------CSMGEFINTDKGENTLELVTCS---LDSTIVAWNCFTGQQLFKITQAEIKGLEAPWISLSLAPETLTKGNSGVVACGS--NNGLLAVIN----------------CNNGGAILHLSTVI-------------ELKPEQDELDASIESISWSSKFSLMAIGLVCGEILLYDTSAWR-VRHKFVLEDSVTKLMFDND------DLFASCINGKVYQFNARTG-QEKFVCVGHNMGVLDFILLHPVANTGTEQKRKVITAGDE-------GVSLVFEVPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -351664 for 3177 contacts (-110.7/contact) +
2D Compatibility (PS) -38969 + (NN) -1813 + (LL) 8488
1D Compatibility (HY) -5200 + (ID) 3800
Total energy: -392958.0 ( -123.69 by residue)
QMean score : 0.119
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