Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARVTLVLRYAARSDRGLVRANNEDSVYAG----------------------------ARLLALADGMGGHAAGEVASQLVIAALAHLDDDEP-------------GGDLLAKLDAAVRAGNSAIAAQVEME-PDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEE-------AHSHPQRSLIMRALTGHE------VEPTLTMREA-RAGDRYLLCSDGLSDPVSDETILEAL-QI------------PEVAESAHRLIELALRGGGPDNVTVVVADVVDYDYGQTQPILAGAVSGDDDQLTLPNTAAGRASAISQRKEIVKRVPPQADTFSRPRWSGRRLAFVVALVTVLMTAGLLIGRAIIRSNYYVADYAGSVSIMRGIQGSLLGMSLHQPYLMGCLSPRNELSQISYGQSGGPLDCHLMKLEDLRPPERAQVRAGLPAGTLDDAIGQLRELAANSLLPPCPAPRATSPPGRPAPPTTSETTEPNVTSSPASPSPTTSAPAPTGTTPAIPTSASPAAPASPPTPWPVTSSPTMAALPPPPPQPGIDCRAAA |
4OIC Chain:B ((147-460)) | ------VPLWGHKSICGR-RPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHFFGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGN----AVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNRED-EYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKAH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111033 for 2018 contacts (-55.0/contact) +
2D Compatibility (PS) -24362 + (NN) -6421 + (LL) 12704
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -139312.0 ( -69.03 by residue)
QMean score : 0.430
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