Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKL-----AAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVM-VDLDADPEVLA--AAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN
2MUI Chain:A ((4-189))
--------------SSPTYLKHHFLIAMPHMADPNFAQTVTYLVEHNEQGAMGLVINRPSGLNLAEVLEQLKPDALPPARCQHIDIYNGGPVQTDRGFVLHPSGL---SY---QSTLELGELAMSTSQD-VLFAIAAGTGPEKSLISLGYAGWEAGQLEAELSDNAWLTCPADPAILFDLPPEERLSAAAARLGVNLSLLTAQAGHA---
General information:
TITO was launched using:
RESULT:
Template:
2MUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102014 for 1304 contacts (-78.2/contact) +
2D Compatibility (PS) -18951 + (NN) -4130 + (LL) 516
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -134329.0 ( -103.01 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_2MUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MUI-query.scw
PDB file :
Tito_Scwrl_2MUI.pdb
: