Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAM-APTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQS--------------AQYALRRETASPTANCVGSCAVCTQACH
2L3N Chain:A ((1-104))
--------------SVSILRSSVNHREVDEAIDNILRYTNSTEQQFLEAMESTGGRVRIAIAKLLSKQTS----GGSGGSKLGGSGGSRKDLSVKGMLYDSDSQQILNRLRERVSGSTAQSA--------
General information:
TITO was launched using:
RESULT:
Template:
2L3N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16412 for 471 contacts (-34.8/contact) +
2D Compatibility (PS) -9346 + (NN) -1292 + (LL) 3216
1D Compatibility (HY) 5200 + (ID) 1000
Total energy: -19634.0 ( -41.69 by residue)
QMean score : -0.127
(partial model without unconserved sides chains):
PDB file :
Tito_2L3N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3N-query.scw
PDB file :
Tito_Scwrl_2L3N.pdb
: