Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLVRPDLPVRIGVQLQPQH------------APHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKL----------------NPPPTR--DIPVLIGGGGERKTLRLVAEYADIWHSFT-AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR |
| 1NQK Chain:A ((1-238)) | --------MSLNMFWFLPTHGDGHYLGTEEGSRPVDHGYLQQIAQAADRLGYTGVLIPTGRS---------CEDAWLVAASMIPVTQRLKFLVA-LRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFL-DHSERYEASAEFTQVWRRLLQRETVDFNGKHIHVRGAKLLFPAIQQPYPPLYFGGSSDV-AQELAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRK------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98082 for 1422 contacts (-69.0/contact) +
2D Compatibility (PS) -20691 + (NN) -9828 + (LL) 2724
1D Compatibility (HY) -3200 + (ID) 1500
Total energy: -130577.0 ( -91.83 by residue)
QMean score : 0.453
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