Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------------------------------------------------------------------------------MDYTLRRRSLLAEVYSGRTGVSEVCDANPYLLRAAKFHGKPSRVICPICRKEQLTLVSWV-F-GEHLGAVSGSARTAEELILLATRFSEFAV---HVVEVCRTCSWNHLVKSYVLG-AARPARPPRGSGGTRTARNGARTASE------------------------------------------------------------------------------------------------------------------------ |
5COZ Chain:A ((12-358)) | DLNDYENVLNSLDEEQIGKLPQNIKCVVNDKLNIDSEINIWDATSYYVKSGKVKAINFSENKDKCYDLMEKLAKAINLNKDVCVQSHRSENGNEIYLWDNNYTQDSIAIRNDSALAETHDGKLAVS-----------ASKFGTYYS----PFNDKDKFRTDKQLMFMS-AEEAEELAVKTAKELEINVCEKNELYVLDDKNTLIFPEDDTDKQNDTYVFFMFPDVYGIPY----SRCPENEALTGYANQENHLVIAMDEKGISFLDIPPLYDWVETTETGEILHPSSILSKEVDKLKKYVTSGDIEVSEISLEYMLFADKNETYDIKPVWVVYYYQNQLVTGENSYTQKMALYDVYDAYTGEEYRIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5COZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11181 for 655 contacts (-17.1/contact) +
2D Compatibility (PS) -11213 + (NN) 3143 + (LL) 856
1D Compatibility (HY) 5200 + (ID) 450
Total energy: -13645.0 ( -20.83 by residue)
QMean score : -0.027
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