Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVILLPMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIVPPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGSTITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYGISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKALSPNDRAAQVFPETVPPDLARAENQTKGPNGLIERQVTRELLELF-NIDEQTLNTQGLVVTTTIDPQAQRAAEKAVAKYLDGQ--DPDMRAAVVSIDPHNGAVRAYYGGDNA-NGFDFA-QAGLQTGSSFKVFA-LVAALEQG-IGL-GYQVDSSPLTVD--GIKITNVEGEGCGTCNIAEALKMSLNTSYYRLMLKLNGGPQAVADAAHQAGIASSFPGVAHTLSEDGKGGPPNNGIVLGQYQTRVIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAAMEPIAGYSRGHNL-AGGRDSAAKTGTTQFGDTT-ANKDAWMVGYTPSLSTAVWVGTVKGDEPLVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPEVPPSETVIQPTVEIAPGITIPIGPPTTITLAPPPPAPPAATPTPPP |
2V2F Chain:F ((5-381)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YPAYMDNYLKEVINQVEQETGYNLLTTGMDVYTNVDQEAQKHLWDIYNSDQYVSYPDDDLQVASTVVDVSNGKVIAQLGARH-SFGTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATMVNDIPYNYPGTSTPVYNWDRAYFGNITLQYALQQSRNVTAVETLNK--VGLDRAKTFLNGLGIDYPSM--HYANA-----ISSNTTESNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFS----DVGTRAMKETTAYMMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTD--YVAPDEMFVGYTRKYSMAVWTGYSNRLTPI------VGDGFLVAAKVYRSMITYLSEGS-PEDWNIPEGLYRNG-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92235 for 3038 contacts (-30.4/contact) +
2D Compatibility (PS) -39032 + (NN) -26583 + (LL) 16132
1D Compatibility (HY) -8000 + (ID) 4100
Total energy: -153818.0 ( -50.63 by residue)
QMean score : 0.463
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