Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTR-LTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQ----VARY-QRLLH---P--WVNMAMDTVVAIEPEIVTGIRIVADSRTP
2HQ9 Chain:A ((4-147))
---------------VRTLSALECTKVLTANRVGRLACAKDGQPYVVPLYYAYSDAHLYAFSMPGKKIEWMRA------NPRVSVQVDEHGQG-RGWKSVVVDGRYEELPDLIGHKLQRDHAWSVLSKHTDWWE----APHVFFRILIEQVSGREA-------
General information:
TITO was launched using:
RESULT:
Template:
2HQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73229 for 818 contacts (-89.5/contact) +
2D Compatibility (PS) -13399 + (NN) -7746 + (LL) 1532
1D Compatibility (HY) -400 + (ID) 1250
Total energy: -94492.0 ( -115.52 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_2HQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQ9-query.scw
PDB file :
Tito_Scwrl_2HQ9.pdb
: