Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGWVAKIFRVGRVVEPAAPLPAAIAEPPAGVRGSLQIRHVDAGSCNGCEVEISGAFGP-VYDAERFGARLVASP---------------------QHADALLVTGVVTHNM----------AGPLRKTLEATPRPRVVIACGDCALNRGVFADAY--GVVGAVGEVV--PVDVEIAGCPPTPAAIMAALRSVTGK
3MYR Chain:A ((2-163))
--------------------------------RRPSVIWLSFQECTGCTESLTRAHAPTLEDLILDFISLDYHHTLQAASGEAAEAARLQAMDENRGQYLVIVDGSIPGPDANPGFSTVAGHSNYSILMETVEHAAAVIAVGTCAAFGGLPQARPNPTGAMSVMDLVRDKPVINVPGCPPIPMVITGVIAHYLV-
General information:
TITO was launched using:
RESULT:
Template:
3MYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80105 for 1033 contacts (-77.5/contact) +
2D Compatibility (PS) -13459 + (NN) -3232 + (LL) 2468
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -99978.0 ( -96.78 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_3MYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MYR-query.scw
PDB file :
Tito_Scwrl_3MYR.pdb
: