Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------MRDRILAAVCDVLYIDEADLIDGDETDLRDLGLDSVRFVLLMKQLGVNRQSELPSRLAAN-PSIAGWLRELEAVCTEFG-
2LIU Chain:A ((1936-2034))
SGLVPRGSHMTPQVNQVNLSEIKQVLKQQLAEALYTEESEI--AEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILSSQGT
General information:
TITO was launched using:
RESULT:
Template:
2LIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44788 for 509 contacts (-88.0/contact) +
2D Compatibility (PS) -8311 + (NN) -6689 + (LL) 128
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -63510.0 ( -124.77 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2LIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIU-query.scw
PDB file :
Tito_Scwrl_2LIU.pdb
: