Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R----TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDD----LLVLLRRLHRRDNVGRIVVHLAPWLEPQP-ICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPVAVAVLRRLAPRARITGGVDRVELALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 3E70 Chain:C ((128-279)) | -KPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTFRAGAIEQLEEH-----------AKRIGVKVIKHSYGADPAAVAYDAIQHAK-ARGIDVVLIDTAGRSETNRNLMDEMK-------------KIARVTKPNLVIFVGDALAGNAIVE----------QARQFN-EAVKIDGIILTKLD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130822 for 1081 contacts (-121.0/contact) +
2D Compatibility (PS) -15626 + (NN) -10290 + (LL) 15012
1D Compatibility (HY) -400 + (ID) 850
Total energy: -142976.0 ( -132.26 by residue)
QMean score : 0.327
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