Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVT--VMGLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARR-------LHLDVRWVVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
3B44 Chain:A ((1-180))
---------------------------------ERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFARYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFS--GPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSL-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B44.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153308 for 1407 contacts (-109.0/contact) +
2D Compatibility (PS) -17295 + (NN) -4134 + (LL) 5952
1D Compatibility (HY) -12800 + (ID) 1750
Total energy: -183335.0 ( -130.30 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_3B44.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B44-query.scw
PDB file :
Tito_Scwrl_3B44.pdb
: