Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEF---ADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
5I01 Chain:D ((14-195))
----------FAESIRAKQEA--EKILVEPTVQAAELMLQCLMNDGKILACGNGGSAADAQHFAAEMTG-------ELAAVALTTDTSALTAIGNDYGFDHVFSKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAMLKDTDVLLNVPHPRTARIQENHILLIHAMCDCIDSVL-----
General information:
TITO was launched using:
RESULT:
Template:
5I01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118485 for 1459 contacts (-81.2/contact) +
2D Compatibility (PS) -19061 + (NN) -10514 + (LL) 2060
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -165050.0 ( -113.13 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_5I01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5I01-query.scw
PDB file :
Tito_Scwrl_5I01.pdb
: