Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPRNPADYVIGDDVEVSDVDLKQEEVYVDGERLTDERVEQMASESLRLAREREANLIPGGKSLSGGSAHSPAVQV-VVSKATHAKLKELARSRKMSVSKLLRPVLDEFVQRETGRILPRR
3H87 Chain:C ((2-45))
-------------------------------------------------------------------------SDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARV------
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13689 for 189 contacts (-72.4/contact) +
2D Compatibility (PS) -4730 + (NN) -2474 + (LL) 4508
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -18385.0 ( -97.28 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: