Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRYVA
3K67 Chain:A ((30-158))
---EKFEGELK--EGYRFE--YEKKLCEIDVAMFGLISGDLNPVHFDEDFASKTRFGGRVVHGMLTTSLVSAAVAR--LP-G--T-VVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKN-----RYTIDVKCYT-GD-KVVAEGVVKVLI--
General information:
TITO was launched using:
RESULT:
Template:
3K67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54898 for 938 contacts (-58.5/contact) +
2D Compatibility (PS) -14196 + (NN) -2967 + (LL) 1908
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -76003.0 ( -81.03 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_3K67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K67-query.scw
PDB file :
Tito_Scwrl_3K67.pdb
: