Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAVR--GPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQP-N--LSRMFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLRETANWP----QGQAFATLPSMMHITLNAILRAIFGAGGSEL--DELRRLIPPWVTLGSRL-AALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYDDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNG--------------GHELRQAAILEVQRARTVIDFAARRVNPPVYQLGE--WVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKP-------------------SPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSH--GRGVAFTPKDGGRVVMRRR |
| 4UYM Chain:A ((1-469)) | --------------KTPPVVFHWFPFIGSTISYGIDPYKFFFDCRAKYGDIFTFILLG-KKTTVYLGTKGNDFILNGKLRDVCAEEVYSPLTTPVFGRHVVYDCPNAKLMEQKKFVKYGLTSDALRSYVPLITDEVESFVKNSPAFQGHKGVFDVCKTIAEITIYTASRSLQGKEVRSKFDSTFAELYHNLDMGFAPINFMLPW----A-PLPHNRKRDAAQRKLTETYMEIIKARRQAGSKKDSEDMVWNLMSCVYKNGTPVPDEEIAHMMIALLMAGQHSSSSTASWIVLRLATRPDIMEELYQEQIRVLGSDLPPLTYDNLQKLDLHAKVIKETLRLHAPIHSIIRAVKN-PMAVDGTSYVIPTSHNVLSSPGVTARSEEHFPNPLEWNPHRWDENIAASAEDDEKVDYGYGLVSKGTNSPYLPFGAGRHRCIGEQFAYLQLGTITAVLVRLFRFRNLPGVDGIPDTDYSSLFSKPLGRSFVEFEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212790 for 3417 contacts (-62.3/contact) +
2D Compatibility (PS) -45911 + (NN) -24337 + (LL) 844
1D Compatibility (HY) -19600 + (ID) 3850
Total energy: -305644.0 ( -89.45 by residue)
QMean score : 0.528
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