Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKG------EVRAMVR-PAA-NTRSID----DLPLTRFHGDVFDTATVAEAMAGCDDVYYCVVDTRAWL--RDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAVFGR-LPFTM--RGIRLEAVGVDDAARALILAAERGRNGERYLISER-MMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPR-PVEESIREAARFWAAMRTVGKDPAAS |
| 1R6D Chain:A ((1-315)) | --MRLLVTGGAGFIGSHFVRQLLA----GAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL--EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVRE-WVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWS--SVRKV-A-------D--------RK--------GHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -163986 for 2544 contacts (-64.5/contact) +
2D Compatibility (PS) -32364 + (NN) -14564 + (LL) 2684
1D Compatibility (HY) -7200 + (ID) 3950
Total energy: -219380.0 ( -86.23 by residue)
QMean score : 0.568
|
|
|