Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTHDDTWDIKTSVGATAVMVAAARAVETDRPDPLIRDPYARLLVTNAGAGAIWEAMLDPTLVAKAAAIDAETAAIVAYLRSYQAVRTNFFDTYFASAVAAGIRQVVILASGLDSRAYRLD-WPAGTIVYEIDQPKVLSYKSTTLAENGVTPSAGRREVPADLRQDWPAALRDAGFDPTARTAWLAEGLLMYLPAEAQDRLFTQVGAVSVAGS-RIAAETAPVHGEERRAEMRARFKKVADVLGIEQTIDVQELVYHDQDRASVADWLTDHGWRARSQRAPDEMRRVGRWVEGVPMADDPTAFAEFVTAERL |
3LST Chain:A ((183-333)) | ----------------------------------------------------------------------------------------------------PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDV----AGRWKVVEGDFLRE------VPH-----ADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH---QSKEMDFMM-L-----AARTGQ-ERTA--AELEPLFTAAGLRLDRV---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LST.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20220 for 1094 contacts (-18.5/contact) +
2D Compatibility (PS) -15512 + (NN) -36 + (LL) 12960
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -26158.0 ( -23.91 by residue)
QMean score : 0.319
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