Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRST
4A6A Chain:C ((1-189))
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTVGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRS-
General information:
TITO was launched using:
RESULT:
Template:
4A6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81465 for 1321 contacts (-61.7/contact) +
2D Compatibility (PS) -20455 + (NN) -11899 + (LL) 52
1D Compatibility (HY) -25200 + (ID) 9400
Total energy: -148367.0 ( -112.31 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_4A6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A6A-query.scw
PDB file :
Tito_Scwrl_4A6A.pdb
: