Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANTGSLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPPPIERGSQFSQDADPR--YADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLDPEAAAAGAAAVAGQGRG
1BQ4 Chain:C ((2-235))
-----KLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKP-SKPSYYLDPEAAAA-----------
General information:
TITO was launched using:
RESULT:
Template:
1BQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106422 for 1922 contacts (-55.4/contact) +
2D Compatibility (PS) -25452 + (NN) -18810 + (LL) 628
1D Compatibility (HY) -20800 + (ID) 7400
Total energy: -178256.0 ( -92.75 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_1BQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BQ4-query.scw
PDB file :
Tito_Scwrl_1BQ4.pdb
: