Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVLLTGAAGFIGSRVDAALRAAG--HDVVGVDALLPAAHGPN-P--VLPP--GCQRVDVRDASALAPLLA--GVDLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDGGQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR |
| 4EGB Chain:A ((25-333)) | MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAES---------IPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGK-----------------------------------TGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEK---LIPLMVT-NALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH--K--GRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD--GHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165222 for 2453 contacts (-67.4/contact) +
2D Compatibility (PS) -32332 + (NN) -21013 + (LL) 924
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -231743.0 ( -94.47 by residue)
QMean score : 0.481
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