Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDV--EKRIGGIDILINNAGRSIRRPLAE-SLERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS-EASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 3UF0 Chain:B ((25-223)) | ---------------------------------GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWG-RTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR---VDVLVNNAGIIARAPAEEVSLGRWREV---LTVNLDAAWVLSRSFGTAMLAHGSGRIVTIAS--MLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADD--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122596 for 1599 contacts (-76.7/contact) +
2D Compatibility (PS) -20683 + (NN) -6282 + (LL) 7500
1D Compatibility (HY) -10400 + (ID) 3550
Total energy: -156011.0 ( -97.57 by residue)
QMean score : 0.510
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