Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPKKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNANDVDAAAKIIAGTARSMGITVE
3EGV Chain:B ((1-77))
----KKVVAVVKLQLPAGAATPAPPVGPALGQHGANIMEFVKAFNAATANMGDAIVPVEITIYADRSFTFVTKTPPASYLI-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52908 for 523 contacts (-101.2/contact) +
2D Compatibility (PS) -8405 + (NN) -3780 + (LL) 4944
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -70349.0 ( -134.51 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_3EGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EGV-query.scw
PDB file :
Tito_Scwrl_3EGV.pdb
: