Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARVSGAAAAEAALMRALYDEHAAVLWRYALRLTG---DAAQAEDVVQETLLRAWQHPEVIGDTA-RPARAWLFTVARNMIIDERRSARFRNVV-------------------G-STDQS--------------------------GTPE-------------Q---STPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR |
1RP3 Chain:A ((3-234)) | ------NPYSNQIEREELILKYLPLVKAIATNIKKHLPEDVDIRDLISYGVIGLIKAVDNLSTENPKRAEAYIKLRIKGAIYDYLRSLDFGSRQVREKERRIKEVVEKLKEKLGREPTDEEVAKELGISTEELFKTLDKINFSYILSLEEVFRDFARDYSELIPSSTNVEEEVIKRELTEKVKEAVSKLPEREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLREMLSN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45382 for 1015 contacts (-44.7/contact) +
2D Compatibility (PS) -18388 + (NN) -12440 + (LL) 792
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -82768.0 ( -81.54 by residue)
QMean score : 0.484
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