Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDL-PVPADTANL--REGADLNNALLALLPLVGVWRGEGEGRGPDGDYRFGQQIVVSHDGGDYLNWESRSWRLT----ATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRTQSSWE---LVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEE--RVDADGGLVPHLSARLSRFVG---------- |
| 4MB0 Chain:A ((9-261)) | PRYWSLYYREKIIEGMEKGMTAKAGLIAHGRGEAFDYLIGERTIEPAERAMRAAVAKLLLAENPVVSVNGNVAALVPKETIELARALNAKLEINLFYRTEDRVKAIAEELR-------KYDPEIELLGINPTKRIPGLEHERGKVDENGIWKADVVVV------PLEDGDRTEALVRMGKFVITIDLNPLSRSARMADITIVDNIVRAYP-RMTELAREMKDYSRGELIRIIEEYDNGKTLNDVLLHIRDRLTKLAEGGIWRKKQLD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3369 for 1736 contacts (-1.9/contact) +
2D Compatibility (PS) -21933 + (NN) -1018 + (LL) 752
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -33868.0 ( -19.51 by residue)
QMean score : 0.108
|
|
|