Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDSDARLASDLSLAVMRLSRQLRFRNPSSPVSLSQLSALTTLANEGAMTPGALAIRERVRPPSMTRVIASLADMGFVDRAPHPIDGRQVLVSVSESGAELVKAARRARQEWLAERLATLNRSERDILRSAADLMLALVDESP
4RGU Chain:A ((18-153))
-----PRLSYMIARVDRIISKYLTEHLSALEISLPQFTALSVLAAKPNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTH--RILVTVTPSGLDKLNQCNQVVQQLEAQMLQGVDINLAFLIRNNLELMVKNLST--
General information:
TITO was launched using:
RESULT:
Template:
4RGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41391 for 818 contacts (-50.6/contact) +
2D Compatibility (PS) -15088 + (NN) -12054 + (LL) -36
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -78169.0 ( -95.56 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_4RGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RGU-query.scw
PDB file :
Tito_Scwrl_4RGU.pdb
: