Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLSRATVAHR-SGTTTYPIIDSATGLAWIAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIAPYSLRGRTHPTVAAPRTWAELDDP-ALRQLSYDEVLTRIARDGDLLERLDADAPVADRLTRYRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPDNTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTGEVIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQWAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLDSSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPELLPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGGRSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAKGITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE |
5DMU Chain:A ((14-298)) | --HIEGHDIKVTNPDKVLFPEDGITKGELVDYYRRISGVMVPLVRGRPMTMQRFPDGIGKEGFFQKEASDYFPDWVHRATLELGKGGIQHQVVCDDAATLVYLASQAMITPHVFLSRID--------KVHYPDRLIFDLDPPD-NNFETVRSAAKTIREALDAEGYPVYLMTTGSRGLHVVVPLDRSADFDTVRAFARGFGEKLTKKYPDRFTIELSKEKRRGRLFLDYLRNSYGQTGVAPYGVRARSGAPVATPITWDELDDISGSQEYNIRNIMGRMDKRGDAWKYIDKDRTSI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101828 for 2348 contacts (-43.4/contact) +
2D Compatibility (PS) -30212 + (NN) -12086 + (LL) 24856
1D Compatibility (HY) -19200 + (ID) 4550
Total energy: -143020.0 ( -60.91 by residue)
QMean score : 0.420
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