Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3PZK Chain:C ((3-254))
--YETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQF---
General information:
TITO was launched using:
RESULT:
Template:
3PZK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132328 for 2063 contacts (-64.1/contact) +
2D Compatibility (PS) -27211 + (NN) -9321 + (LL) 456
1D Compatibility (HY) -30400 + (ID) 12600
Total energy: -211404.0 ( -102.47 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3PZK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PZK-query.scw
PDB file :
Tito_Scwrl_3PZK.pdb
: