Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVALIWLIAALVLVGAEALTGDMFLLMLGGGALAASVSSWLLAWPMWADGAVFLLVSVLLLVLVRPAVRRRLTQTKGVQLGIEALEGKKAVVLGRVARDG-GQVKLDGQVWTARPLNDGDVFEPGDSVTVVQIDGATAVVFKDV-----
2K5H Chain:A ((1-101))
----------------------------------------------MGSSHHHHHHSSGRENLYFQGHMAARITGEPSKKAVSDRLIGRKGVVMEAISPQNSGLVKVDGETWRATS---GTVLDVGEEVSVKAIEGVKLVVEKLEEQKGS
General information:
TITO was launched using:
RESULT:
Template:
2K5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18778 for 481 contacts (-39.0/contact) +
2D Compatibility (PS) -9932 + (NN) 3387 + (LL) 4508
1D Compatibility (HY) -1600 + (ID) 1300
Total energy: -23715.0 ( -49.30 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_2K5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5H-query.scw
PDB file :
Tito_Scwrl_2K5H.pdb
: