Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
2YIZ Chain:B ((1-68))
-SNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLED-
General information:
TITO was launched using:
RESULT:
Template:
2YIZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40554 for 421 contacts (-96.3/contact) +
2D Compatibility (PS) -7725 + (NN) -3520 + (LL) 180
1D Compatibility (HY) -9200 + (ID) 3400
Total energy: -64219.0 ( -152.54 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_2YIZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YIZ-query.scw
PDB file :
Tito_Scwrl_2YIZ.pdb
: