Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYERRHERGMCDRAVEMTDVGA--TAAPTGPIARGSVARVGAATALAVACVYTVIYLAARDLPPACFSIFAVFWGAL------GIATGATHGLLQETTREVRWV--------------------RSTQIVAGHRTHPLRV------AGMIGTVAAVVIAGSSPLWSRQLFVEGRWLSVGLLSVGVAGFCAQATLLGALAGVDRWTQYGSLMVTDAVIRLAVAAAA--VVIGWGLAGYLWAATAGAVAWLLMLMASPTARSAASLLTPGGIATFVRGAAHSITAAGASAILVMGF---PVLLKVTSDQLGAKGGAVILAVTLTRA------PLL------VPLSAMQGNLIAHF---VDRRTQRLRALIAPALVVGGIGAVGMLAAG-LTGPWLL--RVGFGPDYQTGGALLAWLTAAAVAIAMLTLTGAA--AVAAALHRAYLLGWVSATVASTLLLLLPMPLETRTVIALLFGPTVGIAIHVAALARRPD- |
| 4BIJ Chain:A ((1-476)) | MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQ-------EFAALLKPLPS-SRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLR-LRDAIVAALDLEKAMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAME---------EIRARGMKEMRICDTLEPVMQTHRLVIRDEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278369 for 3206 contacts (-86.8/contact) +
2D Compatibility (PS) -42711 + (NN) 3832 + (LL) 1680
1D Compatibility (HY) -7200 + (ID) 3350
Total energy: -326118.0 ( -101.72 by residue)
QMean score : 0.110
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