Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAHLCELGFTAT-GEDVVTSAQSAAHLLAGQLA--PGARVLIVGTEALANEVAAVGLRPVRRFED---------------RPD--AVVQGLSMTTGWSDLAEAALAIRA-GALWVAANVDPTLPTERG-LLPGNGSMVAALRTATGMDPRVAGKPAPALMTEAVARGDFRA----ALVVGDRLDTDIEGANAAGLPSLMVLTGVNSAWDAVYAEPVRRPTYIGHDLRSLHQDSKLLAVAPQPGWQIDVGGGAVTVCANGDVDDLEFIDDGLSIVRAVASAVWEARAADLHQRPLRIEAGDERARAALQRWSLMRSDHPVTSVGTQ |
4BKM Chain:C ((16-280)) | LRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDPKAYVLGSPALAAELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSP-YMFQCITE-DFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEA------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105367 for 2006 contacts (-52.5/contact) +
2D Compatibility (PS) -26411 + (NN) -16300 + (LL) 7552
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -164726.0 ( -82.12 by residue)
QMean score : 0.558
|
|
|