Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLATIDKFAYEKSMLINVGDEKGTLLDAAVRRADPALALELGTYLGYGALRIAR-AAPEARVYSVELAEANASNARRIWAHAGVDDRVVCVVGTIGDGGRTLDALTEHGFATGTLDFVFLDHDKKAYLPDLQSILDRGWLHPGSIVVADNVRVPGAPKYRAYMRRQQGMSWNTIEHKTHLEYQTLVPDLVLESEYLG
4P7G Chain:C ((25-204))
VLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD----LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSS--SFECTHYSSYLEYMKVV-----------
General information:
TITO was launched using:
RESULT:
Template:
4P7G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93092 for 1404 contacts (-66.3/contact) +
2D Compatibility (PS) -19486 + (NN) -7756 + (LL) 448
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -140986.0 ( -100.42 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4P7G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P7G-query.scw
PDB file :
Tito_Scwrl_4P7G.pdb
: