Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTRPRTDAIHHHVVVNAPIERAFAVFTTRFGDFKPREHNLLAIPITETVFECHAGGHIYDRGVDGSVCKWARVLVYEPPSRVLFTWDIGPTWRPETDLAKTSEVEVRFTAQSAETTRVDLEHRHLDRH-----GPGWESVADGVDSEAGWPLYLRRYTDLLCIQVQP
1XN6 Chain:A ((1-143))
MEQQNTLNDIKQTIVFNASIQKVWSVVS------TAEGIASWFMPND---FVLEVGHEFHVQSPFGPS--PCKVLEIDEPNHLSFSWDTDG-----------WVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIV---NEKLKKVVEG
General information:
TITO was launched using:
RESULT:
Template:
1XN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55711 for 949 contacts (-58.7/contact) +
2D Compatibility (PS) -14724 + (NN) -4811 + (LL) 1612
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -80084.0 ( -84.39 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_1XN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XN6-query.scw
PDB file :
Tito_Scwrl_1XN6.pdb
: