Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------MNSHCSHTFITD-NRSPRARRGHAMSTLHKVKAYFGMA-PMEDYDDEYYDDRAPSRGYARPRFDDDYGRYDG-RDYD--------DARSDS-RGDLRGEPADYPPPGYRGGYADEPRFR-PREFDRAEMTR-PRFGSWLRNSTR---GALAMDPRRMAMM--FEDGH----------------------PLSKITTLRPKDYSEARTIGERFRDGSPVIMD-LVSMDNADAKRL------VDFAAGLAFAL------------------RGSFDK-----V-ATKVFLLSPADVDVSPEERRRIAETGFYAYQ |
4RGL Chain:A ((8-335)) | YQPPYTITPAIVNLVAEIGEIIGRYTVLAEQNLTPRLRRENRIRTIQASLAIENNTLTLEQVTAVIDGKRVLGHPREIQEVRNAFATYEAMEDWDASVEGDLLAAHELLMRG-LVDETGRYRSGG-VGIFRGEQLVHMAPPADRVP-KLMADLLDWLENTNEHPLVASCIFHYEFEFIHPFADGNGRMGRLWQTLILRNWKPLLAYLPVETVIRDRQEDYYRVLAVADSQADATPFVEFMLGALRDAVREAVSTDHQVTDQVAALIRAIGGGELSSNDLMQALGLSHRPTFRNNYLNPAMEDEWIERTQPDSPRSPTQRYRLTGKGQR--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 17193 for 1395 contacts (12.3/contact) +
2D Compatibility (PS) -24436 + (NN) -6274 + (LL) 580
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -21887.0 ( -15.69 by residue)
QMean score : 0.144
|
|
|