Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRR-AGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
4R4E Chain:B ((6-54))
-----------------------RRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARTEGNRRLFSFHDV---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4R4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33279 for 278 contacts (-119.7/contact) +
2D Compatibility (PS) -5469 + (NN) -3478 + (LL) 5252
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -38824.0 ( -139.65 by residue)
QMean score : 0.693
(partial model without unconserved sides chains):
PDB file :
Tito_4R4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R4E-query.scw
PDB file :
Tito_Scwrl_4R4E.pdb
: