Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFVITNPEALTVAATEVRRIRDRAIQSDAQVAPMTTAVRPPAADLVSEKAATFLVEYARKYRQTIAAAAVVLEEFAHALTTGADKYATAEADNIKTFS
3GWK Chain:C ((3-96))
MSQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVI----DENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQI-
General information:
TITO was launched using:
RESULT:
Template:
3GWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10738 for 525 contacts (-20.5/contact) +
2D Compatibility (PS) -10259 + (NN) -2989 + (LL) -64
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -26400.0 ( -50.29 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_3GWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWK-query.scw
PDB file :
Tito_Scwrl_3GWK.pdb
: