Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAFGVEPYGQPKYLEIAGKRMAYIDEG--KGDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPD-RYSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQ-GEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFINAEPGAII-TGRIRDYVRSWPNQTEITV-PGVHFVQEDSPEEIGAAIAQFVRRLRSAAGV |
| 4F5Z Chain:A ((12-293)) | -----------PHYVEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDK-----PDLDYFFDDHVRYLDAFIEAVGL-EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLK-PVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIARWLPAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179513 for 2390 contacts (-75.1/contact) +
2D Compatibility (PS) -28897 + (NN) -7441 + (LL) 404
1D Compatibility (HY) -31200 + (ID) 6550
Total energy: -253197.0 ( -105.94 by residue)
QMean score : 0.507
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