Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPEHAIVQFVKAICSPMALAS
4O9K Chain:A ((6-128))
-TFVRDIMHTGDDTPVIGLEASVRDALLEMTAKKLGMTAIVDGAGTIQGVFTDGDL-RRLLEKAQDIHATPITAVMTRSCVTVEGSLLAAEAVRIMEQKRINALPVVENGRLIGAINMHDLLRAG--------------------
General information:
TITO was launched using:
RESULT:
Template:
4O9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74088 for 905 contacts (-81.9/contact) +
2D Compatibility (PS) -13360 + (NN) -7635 + (LL) 2336
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -101747.0 ( -112.43 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4O9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O9K-query.scw
PDB file :
Tito_Scwrl_4O9K.pdb
: