Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MRARSDAGGQSVKSRTSNRSRSSRRSRVRSSISALVDNPQARPRELPVLCGWPVVRVEPVCEFVPEP--------------VCGQAEVLGEPAAAHRVTSARRSPSTTVCSRSQKASAVVISSVSSVARVRRASVSSVDATTA- |
4UAP Chain:A ((2-151)) | SHMNITVSGDSSQLQSGMGLDKLIDGTTSSDDSSRMDLKWIFTSDQQDKGTLPFEMTFEFNEPKTLENFTIYNRMNSNGTINIAAMKKVKAVGYLNGEEFDLGEKANITSATTVYELGGKEFDKIVITALDSHKDKNTLAINEIEFYEKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7997 for 902 contacts (-8.9/contact) +
2D Compatibility (PS) -13801 + (NN) -628 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -27476.0 ( -30.46 by residue)
QMean score : 0.057
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