Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVFGFADCIDLLANYTALCIDEFELDDPGNTTLISRLLSALVERGVSVAATSNTLPEQLGEGRFAAQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLI-EGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 1NP6 Chain:A ((5-174)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------MIPLLAFAAWS--GTGKTTLLKKLIPALCARGIRPGLIKHTHHELRKAGA-------AQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL--DLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70478 for 986 contacts (-71.5/contact) +
2D Compatibility (PS) -16731 + (NN) -3177 + (LL) 13792
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -81544.0 ( -82.70 by residue)
QMean score : 0.244
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