Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHAELIAHAVKAGRARGVPAVLMTFDPHPMEVVYPGSHPAQLTTLTRRAELVQDLGIEVFLVMPFTTDFMK---LTPDRFIHELLVEHLHVVEVVVGENFTFGKKAAGNVDTLRRAGERFGFAVESMSLVSEHHSNETVTFSSTYIRSCVDAGDMVAAMEALGRPHRVEGVVVRGEGRGAELGFPTANVAPPMYSAIPAD-GVYAAWFTVLGHGPVTGTVVPGERYQAAVSVGTNPTFSGRTRTVEAFVLDTTADLYGQHVALDFVGRIRGQKKFESVRQLVAAMGADTERARDLLSTG |
1T6Y Chain:B ((2-282)) | ------------------------VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTI-SYPPEYFLP-DFPGLLMTVESRVEMLSRYARTVVL------DFFRIKDLTPEGFVERYLS---GVSAVVVGRDFRFGKNASGNASFLRKKGVEV-YEIEDVVVQGKR-------VSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIVH----------FPTANIDRGNEKLVDLKRGVY----LVRVHLP------DGKKKFGVMNVGF-------NVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKSARNMID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167837 for 1955 contacts (-85.9/contact) +
2D Compatibility (PS) -27550 + (NN) -4268 + (LL) 3460
1D Compatibility (HY) -24400 + (ID) 4600
Total energy: -225195.0 ( -115.19 by residue)
QMean score : 0.418
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