Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQ-SVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAER-P-ALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGI--------DGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG |
| 1R3E Chain:A ((1-287)) | ---MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVYWVKMRLGLITETFDITGEVVEERE--CNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEG----RDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIPLE-KCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERN---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141689 for 2116 contacts (-67.0/contact) +
2D Compatibility (PS) -28086 + (NN) -676 + (LL) 1776
1D Compatibility (HY) -21600 + (ID) 4650
Total energy: -194925.0 ( -92.12 by residue)
QMean score : 0.514
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