Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLP-------NGVLDAISLPAERADMPRTMPAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGS-TLSGPPLTTLRGRWSVERGLVLTAIVL |
5CMO Chain:A ((3-122)) | ------------------------------------------------------------------------------------------------------------YGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQA-GKPVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDAL-----GKPEFFYGPALSKWLEEQGISRVSLSMSDEEDTVLAFVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35029 for 818 contacts (-42.8/contact) +
2D Compatibility (PS) -11894 + (NN) -4167 + (LL) 6688
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -46752.0 ( -57.15 by residue)
QMean score : 0.235
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