Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPRRPH
2ODK Chain:A ((3-52))
MHVWPVQDAKARFSEFLDACI-TEGPQIVSRRGAEEAVLVPIGEWRRLQAA------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ODK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22147 for 284 contacts (-78.0/contact) +
2D Compatibility (PS) -5383 + (NN) -2402 + (LL) 2512
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -33120.0 ( -116.62 by residue)
QMean score : 0.678
(partial model without unconserved sides chains):
PDB file :
Tito_2ODK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ODK-query.scw
PDB file :
Tito_Scwrl_2ODK.pdb
: