Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSG-FDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHGEHGVAGPWAAGAQRGQP-IYLMGPGGAYAPDPAADWHLLAGDESAIPAIAAALEALPP-DAIGRAFIEVAGPDDEIGLTAPDAVEVNWVYRGGRADLVPEDRAGDHAPLIEAVTTTAWL-PGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 4YLF Chain:A ((4-221)) | -----TALNEIVKKVKIAEDVFDFWIHSPSVSKEARP----GQFVVIRLHEK------------------------GERIPLTVADTKPEEGLFRMVVKVVG---KTTHELSLKKEGDTILDVVGPLGNPSEIENYGNVLLVGGGVGIATLYPIAKALKEAGNNITTVLGARTKDYLIMVDEFKEISDVLLVTDDGSAGMK----G----VVTDAMDKLFRERKFDICWAVGPTI-MMKFCTLKARE-FGVP--IWVSLNPIMVDG--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125408 for 1726 contacts (-72.7/contact) +
2D Compatibility (PS) -22851 + (NN) -9111 + (LL) 3940
1D Compatibility (HY) -8800 + (ID) 1350
Total energy: -163580.0 ( -94.77 by residue)
QMean score : 0.362
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